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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26722425_26724264_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26722425 - 26724264

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGGGAGTG

5'SS Class:

weak_major

3'SS Sequence:

CCTGATTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTGTCTTCTACA

Flanking Amino Acid:

EILNLKWMGFSTYLRFIIKS

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.1

51.6

39.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

70.5

0.46

0.9

61.1

39.8

Minor 5ss

29.8

-2.3

3.7

43.2

45.5

Minor BPS

56.5

0.2

1.9

71.31

40.9

Associated Gene:

Gene:

HSPB11

Ensembl Gene ID:

ENSAPLG00000028953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030774

26722333 - 26725418

3086