Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26748427_26750582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26748427 - 26750582

Intron Length:

2156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

CCTTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

AGGCATGCAATC

Flanking Amino Acid:

LTYSLHTYPKEEELYACQRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

62.3

41.3

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

80.2

0.68

0.7

72.2

32.4

Minor 5ss

28.5

-2.5

3.6

38.6

46.6

Minor BPS

36.6

-1

40.04

32.7

Associated Gene:

Gene:

TMEM59

Ensembl Gene ID:

ENSAPLG00000022891

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030584

26743331 - 26750750

7420