Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26751563_26752629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26751563 - 26752629

Intron Length:

1067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CCTACCGAAGCT

Flanking Amino Acid:

SKEVLLSTKIGHTVNKMRKH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

58.2

0.2

1.1

49.1

Major PPT

81.2

0.7

0.9

72.5

42.4

Minor 5ss

37.7

-1.4

3.2

52.9

44.2

Minor BPS

41.3

-0.5

2.4

59.9

49.3

Associated Gene:

Gene:

TCEANC2

Ensembl Gene ID:

ENSAPLG00000002806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002833

26750939 - 26754851

3913