Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26764407_26764877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26764407 - 26764877

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGGGGT

5'SS Class:

major

3'SS Sequence:

CTTTTCCCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

TTTTCCCCCAAG

Flanking Amino Acid:

GRGFKAHFYSAGECQEVYTA

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.6

40.1

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

70.1

0.45

68.4

32.3

Minor 5ss

31.6

-2.1

3.6

46.4

Minor BPS

44.8

-0.5

2.4

45.2

Associated Gene:

Gene:

CDCP2

Ensembl Gene ID:

ENSAPLG00000030212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031280

26764000 - 26766120

2121

ENSAPLT00000029571

26760505 - 26765479

4975