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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26765204_26765271_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26765204 - 26765271

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGTCCGTC

5'SS Class:

weak_major

3'SS Sequence:

ATGCCTGCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TCTGACTTCAGT

Flanking Amino Acid:

AYRKGSRGWRMQLTGLSGEI

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.2

52.2

39.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

59.5

0.22

1.1

54.5

40.8

Minor 5ss

49.5

-0

3.1

70.8

40.3

Minor BPS

46.4

-0.2

2.3

68.1

48.5

Associated Gene:

Gene:

CDCP2

Ensembl Gene ID:

ENSAPLG00000030212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031280

26764000 - 26766120

2121