About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26782815_26783350_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
26782815 - 26783350
Intron Length:
536

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTAAGTTCT
5'SS Class:
strong_major
3'SS Sequence:
CTTTATTCTAAAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTTAT
U12 Branch Point Sequence:
CTCTCTTTATTC
Flanking Amino Acid:
TEVAPRREKYCPVLLEDLIH
Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
89.4
0.93
0.8
83.2
29.3
Major BPS
83.9
0.84
1
73.9
41.3
Major PPT
74.5
0.55
1
74.9
33.6
Minor 5ss
43
-0.8
2.8
56.6
41.9
Minor BPS
59.3
0.27
1.6
65.17
41.7

Associated Gene:

Gene:
MRPL37
Ensembl Gene ID:
ENSAPLG00000003233
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003298
26781877 - 26785692
3816