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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26784564_26785079_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
26784564 - 26785079
Intron Length:
516

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTACGTACC
5'SS Class:
major
3'SS Sequence:
CCTTCTTTCCTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
GGCTTTTTAAAT
Flanking Amino Acid:
ALAKARVLYGNDPKVLEQPI
Intron Amino Acid Position:
339

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.3
0.64
1.1
69.9
40.9
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
78.9
0.65
0.7
72.4
32.3
Minor 5ss
35.5
-1.6
2.8
38.3
39.6
Minor BPS
60.9
0.42
1.4
70.09
40.8

Associated Gene:

Gene:
MRPL37
Ensembl Gene ID:
ENSAPLG00000003233
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000003298
26781877 - 26785692
3816