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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26797245_26797351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26797245 - 26797351

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TCCCCCCTAACT

Flanking Amino Acid:

PNSMDPTRQQGHPNMGGPMQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

75.3

40.8

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

0.72

0.7

76.6

25.5

Minor 5ss

40.5

-1.1

3.1

57.5

46.7

Minor BPS

63.6

0.51

1.8

78.29

43.7

Associated Gene:

Gene:

SSBP3

Ensembl Gene ID:

ENSAPLG00000003426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043354

26790475 - 26800954

10480

ENSAPLT00000003561

26790475 - 26803119

12645