Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26811667_26813026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26811667 - 26813026

Intron Length:

1360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCGC

5'SS Class:

major

3'SS Sequence:

CGCCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAT

U12 Branch Point Sequence:

GTGCCAGCATCT

Flanking Amino Acid:

ILSFCCDGLQGSTSCSREPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.3

49.1

47.6

Major BPS

45.4

-0.2

1.4

51.3

42.7

Major PPT

67.6

0.4

0.8

60.8

29.2

Minor 5ss

42.7

-0.8

3.2

60.2

44.3

Minor BPS

37.1

-0.9

2.3

55.91

45.5

Associated Gene:

Gene:

ACOT11

Ensembl Gene ID:

ENSAPLG00000003835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037368

26808142 - 26819098

10957

ENSAPLT00000031282

26810225 - 26818329

8105

ENSAPLT00000041256

26808142 - 26819098

10957