Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26821802_26823346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26821802 - 26823346

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GACCTTTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

TTTGCAGGACCT

Flanking Amino Acid:

ERKYLPGNLEMQGNPSAPFN

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

67.9

0.4

1.1

44.4

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

41.6

-0.5

2.5

69.74

46.7

Associated Gene:

Gene:

TTC4

Ensembl Gene ID:

ENSAPLG00000003928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004035

26821658 - 26829389

7732