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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26825928_26826732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26825928 - 26826732

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTAATCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAAGTCTTAATC

Flanking Amino Acid:

KPTHLKAIIRGALCHMELKN

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.4

0.66

0.9

70.3

40.9

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

61.1

0.33

1.3

62.3

37.2

Associated Gene:

Gene:

TTC4

Ensembl Gene ID:

ENSAPLG00000003928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020392

26821658 - 26828542

6885

ENSAPLT00000017337

26821658 - 26827957

6300

ENSAPLT00000004035

26821658 - 26829389

7732

ENSAPLT00000044681

26821658 - 26829389

7732

ENSAPLT00000040271

26821658 - 26828542

6885