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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26827729_26829327_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26827729 - 26829327

Intron Length:

1599

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCATTCCTT

5'SS Class:

weak_major

3'SS Sequence:

GGCGCGGGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGAGAT

U12 Branch Point Sequence:

GGGAGCACAGCA

Flanking Amino Acid:

WAGPFSIYPAKRGVFPQELE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.3

58.7

45.9

Major BPS

43.6

-0.4

1.3

34.4

42.4

Major PPT

40.3

-0.5

1.6

33.8

40.8

Minor 5ss

41.3

-1

4.2

64.9

40.7

Minor BPS

34.3

-1.1

39.36

39.3

Associated Gene:

Gene:

TTC4

Ensembl Gene ID:

ENSAPLG00000003928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044681

26821658 - 26829389

7732

ENSAPLT00000004035

26821658 - 26829389

7732