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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26873221_26873302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26873221 - 26873302

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GTGTCACTAAGG

Flanking Amino Acid:

VAGLPNRLGADEQLYCRSVW

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.9

36.4

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

0.49

0.9

64.8

36.4

Minor 5ss

32.9

-2

3.2

43.7

Minor BPS

45.1

-0.5

2.2

54.2

46.1

Associated Gene:

Gene:

PCSK9

Ensembl Gene ID:

ENSAPLG00000004691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004871

26870950 - 26874241

3292