About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26889869_26891127_R


Intron Information:

Intron Rank:
51

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26889869 - 26891127

Intron Length:
1259

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGAGAAC

5'SS Class:
major

3'SS Sequence:
AATATTTCTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
ATTCTCTTACTT

Flanking Amino Acid:
VEKMPVRIYQMVRDENLKFM

Intron Amino Acid Position:
2106

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.1
66.4
39.3

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
77
0.61
0.9
69.8
40.6

Minor 5ss
30.5
-2.2
3.4
41.6
45.4

Minor BPS
63.4
0.5
1.6
79.24
37.1

Associated Gene:

Gene:
USP24

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26879493 - 26937053
57561

26879493 - 26937053
57561