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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26895563_26895995_R


Intron Information:

Intron Rank:
41

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26895563 - 26895995

Intron Length:
433

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAC|GTAAGCAAG

5'SS Class:
major

3'SS Sequence:
TTTCTCCTTCTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
TGTTCCATAATT

Flanking Amino Acid:
CDPALTKEFDYLPPVDSRSI

Intron Amino Acid Position:
1663

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1.3
68.8
43.8

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
85
0.79
0.7
77.9
30.9

Minor 5ss
40.1
-1.1
2.8
48
41.4

Minor BPS
75.3
0.87
1.5
90.08
33.6

Associated Gene:

Gene:
USP24

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26879493 - 26937053
57561

26879493 - 26937053
57561