Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26896141_26896984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26896141 - 26896984

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAAAAAT

5'SS Class:

major

3'SS Sequence:

TTGCTTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TAGATCTTAACT

Flanking Amino Acid:

AAISQQDFHPKCSTADSRLA

Intron Amino Acid Position:

1614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

76.8

31.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

81.5

0.71

0.8

76.8

Minor 5ss

36.2

-1.6

3.2

49.2

41.2

Minor BPS

73.6

0.82

1.3

81.69

39.5

Associated Gene:

Gene:

USP24

Ensembl Gene ID:

ENSAPLG00000005515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042680

26879493 - 26937053

57561

ENSAPLT00000005871

26879493 - 26937053

57561