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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26901658_26901812_R


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
26901658 - 26901812

Intron Length:
155

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTAAT

5'SS Class:
strong_major

3'SS Sequence:
TCTGTGAATGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAA

U12 Branch Point Sequence:
ATAAACTTGACA

Flanking Amino Acid:
GVYSICLQLARFLLVGQTMP

Intron Amino Acid Position:
1231

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
98.8
1.15
0.6
96.1
12.1

Major BPS
68.1
0.45
1
73.5
28.6

Major PPT
65.2
0.34
1
59.4
40.8

Minor 5ss
37.4
-1.4
2.8
50.6
45.9

Minor BPS
59.2
0.28
1.6
67.73
37.7

Associated Gene:

Gene:
USP24

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26879493 - 26937053
57561

26879493 - 26937053
57561