About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26907221_26907381_R


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26907221 - 26907381

Intron Length:
161

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGATGA

5'SS Class:
strong_major

3'SS Sequence:
TCTCTTCCGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAA

U12 Branch Point Sequence:
TGGTATTTACCA

Flanking Amino Acid:
LAERYVITIEDLYSVPRTIL

Intron Amino Acid Position:
928

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.6
0.96
0.8
77.8
33.3

Major BPS
85.7
0.89
0.8
85.9
22.5

Major PPT
76.2
0.59
0.9
73.2
31.7

Minor 5ss
37.3
-1.4
3
47.8
47.6

Minor BPS
52.8
0.08
1.8
64.71
41.8

Associated Gene:

Gene:
USP24

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26879493 - 26937053
57561

26879493 - 26937053
57561