Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26910804_26911352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26910804 - 26911352

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGAAC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

AAAATCTTAAAA

Flanking Amino Acid:

LVDGRYTYREYLEAHLKFLA

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

67.6

37.3

Major BPS

77.8

0.69

78.2

31.8

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

38.7

-1.3

3.1

51.2

45.6

Minor BPS

58.1

0.25

1.4

62.18

36.8

Associated Gene:

Gene:

USP24

Ensembl Gene ID:

ENSAPLG00000005515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042680

26879493 - 26937053

57561

ENSAPLT00000005871

26879493 - 26937053

57561