Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26912830_26914052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26912830 - 26914052

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTGGTTTA

5'SS Class:

major

3'SS Sequence:

TCAAACTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

TCAAACTTTACA

Flanking Amino Acid:

IIKCIEDIKRNMKPPRKVMS

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.3

67.1

Major BPS

63.9

0.34

1.2

40.9

Major PPT

72.8

0.51

64.9

40.7

Minor 5ss

38.3

-1.3

41.8

44.9

Minor BPS

49.8

-0

1.9

62.13

43.2

Associated Gene:

Gene:

USP24

Ensembl Gene ID:

ENSAPLG00000005515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042680

26879493 - 26937053

57561