Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26914408_26914901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26914408 - 26914901

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTTTTCTGTACA

Flanking Amino Acid:

LNHLFVLIQKSWETESDRVR

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

84.2

0.77

0.8

79.7

32.4

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

57.4

0.23

1.8

71.49

40.4

Associated Gene:

Gene:

USP24

Ensembl Gene ID:

ENSAPLG00000005515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042680

26879493 - 26937053

57561

ENSAPLT00000005871

26879493 - 26937053

57561