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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27388795_27391332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27388795 - 27391332

Intron Length:

2538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

TTCTCCTGCCCT

Flanking Amino Acid:

NYAAPEVISGRLYAGPEVDI

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

80.7

0.69

0.9

76.5

37.5

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

42.2

-0.5

3.6

76.42

46.1

Associated Gene:

Gene:

PRKAA2

Ensembl Gene ID:

ENSAPLG00000007464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007764

27377887 - 27398074

20188