Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_27433726_27434633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27433726 - 27434633

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTACGCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

CTGTCCCTACGC

Flanking Amino Acid:

CGKDFQCEETGRCIKRHLVC

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.1

31.6

Major BPS

69.6

0.49

59.5

Major PPT

65.1

0.34

0.9

55.3

39.9

Minor 5ss

-2.6

31.7

42.6

Minor BPS

45.6

-0.3

2.2

58.46

46.6

Associated Gene:

Gene:

C8A

Ensembl Gene ID:

ENSAPLG00000008086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008410

27430367 - 27448727

18361