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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2743466_2743885_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2743466 - 2743885

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTTCGTTTG

5'SS Class:

weak_major

3'SS Sequence:

CTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATACATTATAC

Flanking Amino Acid:

EEAHPTLIIPPLPEKFIMKG

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.3

55.3

44.2

Major BPS

75.9

0.64

66.1

40.5

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

-0.9

60.4

Minor BPS

48.3

-0.1

63.5

Associated Gene:

Gene:

SNX7

Ensembl Gene ID:

ENSAPLG00000012736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046166

2741334 - 2760924

19591

ENSAPLT00000013273

2738683 - 2763415

24733