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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27458137_27460333_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
27458137 - 27460333

Intron Length:
2197

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTAT

5'SS Class:
major

3'SS Sequence:
TCCCTCCCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTGAA

U12 Branch Point Sequence:
AACACCAAAATG

Flanking Amino Acid:
QYNPEIIQLKVQPLYQLVTP

Intron Amino Acid Position:
467

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
68.7
38.6

Major BPS
74.6
0.61
1
65.6
41.4

Major PPT
74.1
0.54
0.7
65.9
30.2

Minor 5ss
37.4
-1.4
3.5
55.6
48.6

Minor BPS
43.3
-0.6
1.9
44.61
41.4

Associated Gene:

Gene:
C8B

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

27455248 - 27471212
15965

27455248 - 27471212
15965