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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2747030_2750526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2747030 - 2750526

Intron Length:

3497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTATTT

Flanking Amino Acid:

EYVLYSEILMGVLKRRDHIQ

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.2

0.59

1.1

36.9

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

59.9

0.39

1.7

79.07

37.4

Associated Gene:

Gene:

SNX7

Ensembl Gene ID:

ENSAPLG00000012736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046166

2741334 - 2760924

19591

ENSAPLT00000013273

2738683 - 2763415

24733