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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27505390_27512005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27505390 - 27512005

Intron Length:

6616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATGCA

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCGTTTTCATTT

Flanking Amino Acid:

DKQCEQAVYQVPTSQKKEGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.6

36.5

Major BPS

100

1.24

0.5

100

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

31.3

-2.1

3.4

41.7

44.9

Minor BPS

47.5

-0.1

1.7

62.66

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045113

27488388 - 27513190

24803

ENSAPLT00000025649

27479968 - 27512828

32861