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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27604696_27644380_R

Intron Information:

Intron Rank:

151499

Intron Class:

major

Intron Phase:

Intron Coordinates:

27604696 - 27644380

Intron Length:

39685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

GTTTCTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

58.2

0.2

49.5

35.1

Major PPT

84.7

0.78

0.8

79.7

32.4

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

0.62

1.7

79.83

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047623

27565254 - 27645127

79874