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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27625098_27644380_R

Intron Information:

Intron Rank:

151497

Intron Class:

major

Intron Phase:

Intron Coordinates:

27625098 - 27644380

Intron Length:

19283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAA

U12 Branch Point Sequence:

CTCTCCTTAGAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

57.6

0.19

1.1

56.4

39.5

Major PPT

86.5

0.82

0.7

84.1

30.8

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

60.2

0.32

1.7

68.43

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042510

27565254 - 27645127

79874