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Intron Name: Anas_platyrhynchos_platyrhynchos_8_27994756_27996513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27994756 - 27996513

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

AATACATCTATT

Flanking Amino Acid:

DKVGLQFAAKACVDVRASSV

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

80.7

33.8

Major BPS

66.1

0.4

31.5

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

41.6

-0.9

2.5

52.6

Minor BPS

43.7

-0.4

62.25

41.4

Associated Gene:

Gene:

OMA1

Ensembl Gene ID:

ENSAPLG00000006406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035058

27991513 - 28005058

13546

ENSAPLT00000006649

27986954 - 28005181

18228