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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28000650_28002344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28000650 - 28002344

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TTTTTGTTACCA

Flanking Amino Acid:

EIAHAVLQHAAEKASLVHFL

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

67.7

0.44

38.9

Major PPT

83.7

0.76

0.9

40.1

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

57.6

0.24

2.3

78.35

38.8

Associated Gene:

Gene:

OMA1

Ensembl Gene ID:

ENSAPLG00000006406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035058

27991513 - 28005058

13546

ENSAPLT00000006649

27986954 - 28005181

18228