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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28002453_28002547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28002453 - 28002547

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTGTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCTACTTAATT

Flanking Amino Acid:

EPGVNAFVLPNGQVFVFTGL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

75.4

37.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

77.9

0.63

0.9

71.9

37.5

Minor 5ss

-1.1

2.8

46.3

Minor BPS

77.2

0.93

1.4

88.84

36.2

Associated Gene:

Gene:

OMA1

Ensembl Gene ID:

ENSAPLG00000006406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035058

27991513 - 28005058

13546

ENSAPLT00000006649

27986954 - 28005181

18228