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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28028923_28029766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28028923 - 28029766

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTACTTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTTTGTACTT

Flanking Amino Acid:

SYARQYFKNKAKNDESEREE

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.1

0.32

1.1

37.7

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

50.3

0.09

2.2

78.3

39.3

Associated Gene:

Gene:

MYSM1

Ensembl Gene ID:

ENSAPLG00000006062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024440

28019437 - 28032981

13545

ENSAPLT00000022200

28019064 - 28033975

14912

ENSAPLT00000006334

28019437 - 28033975

14539

ENSAPLT00000032369

28019437 - 28032981

13545