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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28030624_28031198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28030624 - 28031198

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTACA

5'SS Class:

major

3'SS Sequence:

CTTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAACCACTAACT

Flanking Amino Acid:

KSPHKKTGKVMVRSPTKSTS

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

73.8

36.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.7

78.1

Minor 5ss

37.4

-1.4

2.9

47.6

41.1

Minor BPS

49.2

0.02

1.9

69.05

40.4

Associated Gene:

Gene:

MYSM1

Ensembl Gene ID:

ENSAPLG00000006062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006334

28019437 - 28033975

14539

ENSAPLT00000024440

28019437 - 28032981

13545

ENSAPLT00000022200

28019064 - 28033975

14912