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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28031226_28031357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28031226 - 28031357

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTAATTTTAATT

Flanking Amino Acid:

QKEAEKRSMKSPHKKTGKVM

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.8

81.4

35.2

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

63.4

0.5

1.3

72.54

39.1

Associated Gene:

Gene:

MYSM1

Ensembl Gene ID:

ENSAPLG00000006062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022200

28019064 - 28033975

14912

ENSAPLT00000006334

28019437 - 28033975

14539