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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28031436_28032506_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

28031436 - 28032506

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ATAACAATTTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTCTTAATA

Flanking Amino Acid:

AVIEKMLLEEEYYLSNKSLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

43.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.1

0.36

60.5

Minor 5ss

94.2

1.49

0.8

86.6

30.5

Minor BPS

75.4

0.79

1.1

75.34

36.5

Associated Gene:

Gene:

MYSM1

Ensembl Gene ID:

ENSAPLG00000006062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022200

28019064 - 28033975

14912

ENSAPLT00000006334

28019437 - 28033975

14539