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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2804921_2812893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2804921 - 2812893

Intron Length:

7973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTCTACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CAGTCTTCAACT

Flanking Amino Acid:

LSVYAAMYLAMYITSTVKAR

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

0.83

0.7

84.6

29.8

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

62.4

0.47

1.6

73.13

43.9

Associated Gene:

Gene:

PLPPR5

Ensembl Gene ID:

ENSAPLG00000017777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039435

2804548 - 2838731

34184