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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2813145_2837953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2813145 - 2837953

Intron Length:

24809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTCCCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

GGATATTTAACT

Flanking Amino Acid:

LADGGRARAGGIYAFGLFAT

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.4

42.4

Major BPS

79.5

0.73

0.9

36.9

Major PPT

83.3

0.75

0.6

81.9

Minor 5ss

39.3

-1.2

49.3

40.9

Minor BPS

65.2

0.56

1.5

75.81

40.1

Associated Gene:

Gene:

PLPPR5

Ensembl Gene ID:

ENSAPLG00000017777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039435

2804548 - 2838731

34184