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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28336078_28336791_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28336078 - 28336791

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCCCTG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTACAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTTACAACA

Flanking Amino Acid:

RVVQPNHEHKRFYDKKYEVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

54.5

49.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

0.72

0.9

78.9

33.1

Minor 5ss

45.6

-0.5

3.2

64.4

Minor BPS

58.1

0.25

1.8

76.1

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037488

28304846 - 28337021

32176

ENSAPLT00000022009

28304846 - 28337021

32176