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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28361210_28367722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28361210 - 28367722

Intron Length:

6513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTCCCTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

TTCTATCTGACT

Flanking Amino Acid:

LRLCDSLILWLQTFNTAAPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

83.3

0.75

0.6

81.9

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

53.2

0.18

1.9

76.77

39.9

Associated Gene:

Gene:

HOOK1

Ensembl Gene ID:

ENSAPLG00000004631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004883

28361159 - 28387473

26315