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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28379756_28380512_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28379756 - 28380512

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

TCTTAATAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTCTCTTAATA

Flanking Amino Acid:

RAQLETYKRQVQELHNKLSE

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.4

45.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

56.4

0.15

1.2

57.9

40.4

Minor 5ss

34.2

-1.8

3.5

46.9

48.4

Minor BPS

0.72

1.2

76.1

35.4

Associated Gene:

Gene:

HOOK1

Ensembl Gene ID:

ENSAPLG00000004631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004883

28361159 - 28387473

26315