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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28380911_28380994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28380911 - 28380994

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCTT

5'SS Class:

major

3'SS Sequence:

CATGCAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTTGTTCAAAC

Flanking Amino Acid:

QMQQDHLTQAGASRVRSHDN

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

42.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

68.8

0.42

63.4

41.6

Minor 5ss

42.8

-0.8

3.4

46.3

Minor BPS

48.7

-0.1

64.64

40.8

Associated Gene:

Gene:

HOOK1

Ensembl Gene ID:

ENSAPLG00000004631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004883

28361159 - 28387473

26315