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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28383753_28384121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28383753 - 28384121

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TCTCTGTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATCTCTGTAAAC

Flanking Amino Acid:

AELQPDVSQNPQKIGELEAA

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

73.1

43.9

Major BPS

84.4

0.85

34.5

Major PPT

69.8

0.45

65.7

Minor 5ss

39.3

-1.2

2.9

56.1

41.4

Minor BPS

0.01

2.1

65.5

40.4

Associated Gene:

Gene:

HOOK1

Ensembl Gene ID:

ENSAPLG00000004631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004883

28361159 - 28387473

26315