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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28384660_28386174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28384660 - 28386174

Intron Length:

1515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAATA

Flanking Amino Acid:

ERDKKIEALETENKIAKLRD

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

84.2

33.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.6

0.66

0.9

70.4

39.9

Minor 5ss

44.7

-0.6

3.1

45.2

Minor BPS

68.1

0.57

1.7

81.86

32.7

Associated Gene:

Gene:

HOOK1

Ensembl Gene ID:

ENSAPLG00000004631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004883

28361159 - 28387473

26315