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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28394768_28395260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28394768 - 28395260

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAG

U12 Branch Point Sequence:

TTTTCTTTCTCT

Flanking Amino Acid:

TVLAGFLVPKGTVMIPNITS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

71.6

40.2

Major BPS

45.3

-0.2

1.5

41.4

Major PPT

79.1

0.65

0.8

76.5

32.2

Minor 5ss

-1.1

2.8

51.5

44.9

Minor BPS

47.9

-0

3.6

87.39

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003880

28394185 - 28398743

4559