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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28405786_28407310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28405786 - 28407310

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TTGTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GTGGCTTTCATT

Flanking Amino Acid:

YLVEAIEEEKGQPFDPHYKI

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.7

0.74

0.8

74.4

36.5

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

50.2

0.09

1.9

67.66

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003844

28401782 - 28410036

8255