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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28772644_28925043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28772644 - 28925043

Intron Length:

152400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

AGTTCTCTCACT

Flanking Amino Acid:

LYLAYFVHAAGHLGFQDSFV

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.8

78.8

35.5

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

0.72

0.8

77.2

37.1

Minor 5ss

-1.9

3.1

41.3

45.2

Minor BPS

52.4

0.16

2.1

75.83

40.7

Associated Gene:

Gene:

NFIA

Ensembl Gene ID:

ENSAPLG00000003407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043906

28663836 - 29010549

346714