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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28936811_28952662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28936811 - 28952662

Intron Length:

15852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCTATTACTT

Flanking Amino Acid:

QSSGWHEVEPGRGNSLVKPL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

85.6

0.8

80.6

31.1

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

54.6

0.22

1.9

78.06

38.5

Associated Gene:

Gene:

NFIA

Ensembl Gene ID:

ENSAPLG00000003407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043906

28663836 - 29010549

346714

ENSAPLT00000035027

28663836 - 29013112

349277

ENSAPLT00000031167

28663836 - 29013112

349277

ENSAPLT00000022102

28663836 - 29010549

346714