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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28953823_28962297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28953823 - 28962297

Intron Length:

8475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTGTG

5'SS Class:

major

3'SS Sequence:

TCATTCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CATTATTAAATT

Flanking Amino Acid:

RNPEHRGALHGMPSPTTLKK

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

64.9

41.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

74.9

0.56

69.2

41.6

Minor 5ss

29.6

-2.3

3.4

35.9

42.5

Minor BPS

51.4

0.12

1.8

69.44

42.1

Associated Gene:

Gene:

NFIA

Ensembl Gene ID:

ENSAPLG00000003407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043906

28663836 - 29010549

346714

ENSAPLT00000035027

28663836 - 29013112

349277

ENSAPLT00000031167

28663836 - 29013112

349277

ENSAPLT00000003524

28663836 - 29010549

346714