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Intron Name: Anas_platyrhynchos_platyrhynchos_8_28988534_29010472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28988534 - 29010472

Intron Length:

21939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCCGC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGACGAA

U12 Branch Point Sequence:

GGCTGACGAAGT

Flanking Amino Acid:

SFVNIPQQTQSWYLG*

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

54.1

45.2

Major BPS

45.1

-0.3

1.3

38.5

41.2

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

31.4

-2.1

3.3

41.4

45.3

Minor BPS

34.1

-1.1

2.2

48.4

43.6

Associated Gene:

Gene:

NFIA

Ensembl Gene ID:

ENSAPLG00000003407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031167

28663836 - 29013112

349277